An Incrementally Updatable and Scalable System for Large-Scale Sequence Search using the Bentley-Saxe Transformation

Fatemeh Almodaresi, Jamshed Khan, Sergey Madaminov, Michael Ferdman, Rob Johnson, Prashant Pandey, Rob Patro
January, 2022
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Type
Journal article
Publication
BIOINFORMATICS 2022
Prashant Pandey
Prashant Pandey
Assistant Professor

My research interests lie at the intersection of Systems and Algorithms. I design and build theoretically well-founded data structures for big data problems in computational biology, streaming, and file systems.